Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Gm9139-201ENSMUST00000218817 700 ntBASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.18□□□□□ -0.46
Sf3b1Q99NB9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm16219-201ENSMUST00000120096 274 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm14219-201ENSMUST00000120414 288 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm14395-201ENSMUST00000120494 563 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm15329-201ENSMUST00000121408 155 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm38314-201ENSMUST00000195709 625 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm18561-201ENSMUST00000206027 804 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm5468-202ENSMUST00000227851 682 ntBASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sf3b1Q99NB9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm14071-201ENSMUST00000117817 509 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm20495-201ENSMUST00000173902 235 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm29410-201ENSMUST00000188383 694 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm5298-201ENSMUST00000201122 892 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm10263-201ENSMUST00000085163 300 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b1Q99NB9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms