Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26361-201ENSMUST00000158868 186 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28686-201ENSMUST00000187404 609 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm8913-201ENSMUST00000209491 641 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm270-201ENSMUST00000223010 976 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk5rap3Q99LM2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm22323-201ENSMUST00000103832 109 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm12463-201ENSMUST00000118271 849 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm13996-201ENSMUST00000118456 430 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm11783-201ENSMUST00000119549 885 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Mir7677-201ENSMUST00000184226 67 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm44008-201ENSMUST00000204345 412 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm3961-201ENSMUST00000204425 994 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm45113-201ENSMUST00000207518 165 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms