Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cstf3Q99LI7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cstf3Q99LI7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.08□□□□□ -0.63
Cstf3Q99LI7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cstf3Q99LI7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm14724-201ENSMUST00000118400 537 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm16505-201ENSMUST00000179981 232 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cstf3Q99LI7 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm12196-201ENSMUST00000120954 262 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm38151-201ENSMUST00000195085 289 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm2965-201ENSMUST00000198365 343 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm4978-201ENSMUST00000071565 801 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms