Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm37489-201ENSMUST00000191883 159 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm43962-201ENSMUST00000203898 190 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm13786-201ENSMUST00000122371 333 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm37597-201ENSMUST00000191853 382 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm38117-201ENSMUST00000194653 939 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Thumpd1Q99J36 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Thumpd1Q99J36 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms