Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.02□□□□□ -0.49
Pcdhb18Q91Y02 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm13600-201ENSMUST00000117949 744 ntBASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb18Q91Y02 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm11422-201ENSMUST00000118925 1103 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm13117-201ENSMUST00000120894 691 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm17798-201ENSMUST00000182282 1035 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm42816-201ENSMUST00000198433 325 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 AC114645.1-201ENSMUST00000215831 187 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 CT573047.1-201ENSMUST00000223652 851 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 AC134869.4-202ENSMUST00000224350 837 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm5805-201ENSMUST00000072779 456 ntBASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb18Q91Y02 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms