Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb6Q91XZ4 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm15617-201ENSMUST00000118973 771 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm13045-201ENSMUST00000119019 712 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm15329-201ENSMUST00000121408 155 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm9353-201ENSMUST00000200472 604 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm2517-201ENSMUST00000215651 348 ntBASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb6Q91XZ4 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm11244-201ENSMUST00000121243 237 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm42867-201ENSMUST00000202995 469 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm8574-201ENSMUST00000203207 924 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.75□□□□□ -0.53
Pcdhb6Q91XZ4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms