Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ddx41Q91VN6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm6450-201ENSMUST00000200896 574 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx41Q91VN6 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm11246-201ENSMUST00000120880 345 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm37299-201ENSMUST00000193951 826 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Gm2594-201ENSMUST00000214774 742 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx41Q91VN6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ddx41Q91VN6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms