Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm16167-201ENSMUST00000160428 1065 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm43127-201ENSMUST00000195890 2789 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm11996-201ENSMUST00000117538 915 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm9372-201ENSMUST00000168454 430 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm25677-201ENSMUST00000174983 72 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd109Q8R422 Gm19640-201ENSMUST00000214849 464 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 AC154435.1-201ENSMUST00000223938 959 ntBASIC16.11■□□□□ 0.17
Cd109Q8R422 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd109Q8R422 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm5739-201ENSMUST00000208601 1703 ntBASIC16.1■□□□□ 0.17
Cd109Q8R422 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm13039-201ENSMUST00000118638 794 ntBASIC16.1■□□□□ 0.17
Cd109Q8R422 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm29763-201ENSMUST00000205306 616 ntBASIC16.1■□□□□ 0.17
Cd109Q8R422 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC16.1■□□□□ 0.17
Cd109Q8R422 CT010480.2-201ENSMUST00000225424 737 ntBASIC16.1■□□□□ 0.17
Cd109Q8R422 AC159196.1-201ENSMUST00000225524 377 ntBASIC16.1■□□□□ 0.17
Cd109Q8R422 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd109Q8R422 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd109Q8R422 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Cd109Q8R422 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm12943-201ENSMUST00000119616 210 ntBASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC16.09■□□□□ 0.17
Cd109Q8R422 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd109Q8R422 Gm9507-202ENSMUST00000180157 654 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms