Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.55□□□□□ -0.24
Cchcr1Q8K2I2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cchcr1Q8K2I2 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.55□□□□□ -0.24
Cchcr1Q8K2I2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm23085-201ENSMUST00000157849 293 ntBASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm8385-201ENSMUST00000058999 643 ntBASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cchcr1Q8K2I2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm13263-201ENSMUST00000121271 838 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm18734-201ENSMUST00000172937 808 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.53□□□□□ -0.24
Cchcr1Q8K2I2 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Cchcr1Q8K2I2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Gm8459-201ENSMUST00000162504 760 ntBASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cchcr1Q8K2I2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms