Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Gm5616-201ENSMUST00000165252 384 ntBASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm8741-201ENSMUST00000174736 384 ntBASIC11.34□□□□□ -0.59
Vps50Q8CI71 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.34□□□□□ -0.59
Vps50Q8CI71 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vps50Q8CI71 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.33□□□□□ -0.59
Vps50Q8CI71 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Vps50Q8CI71 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps50Q8CI71 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.33□□□□□ -0.59
Vps50Q8CI71 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.33□□□□□ -0.59
Vps50Q8CI71 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm23949-201ENSMUST00000104027 127 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.33□□□□□ -0.6
Vps50Q8CI71 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vps50Q8CI71 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Vps50Q8CI71 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms