Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm27731-201ENSMUST00000185192 107 ntBASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm43118-201ENSMUST00000199149 775 ntBASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc28bQ8CEG5 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Gm11511-201ENSMUST00000118146 540 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Mospd4-201ENSMUST00000180618 576 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Gm38158-201ENSMUST00000194617 339 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Gm18187-201ENSMUST00000196476 984 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28bQ8CEG5 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm25214-201ENSMUST00000104573 129 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm13297-201ENSMUST00000120205 934 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.31□□□□□ -0.6
Ccdc28bQ8CEG5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms