Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm45550-201ENSMUST00000209380 946 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm5705-201ENSMUST00000066241 711 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup88Q8CEC0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup88Q8CEC0 Gm12029-201ENSMUST00000120073 832 ntBASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm10752-201ENSMUST00000218348 729 ntBASIC13.52□□□□□ -0.25
Nup88Q8CEC0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.52□□□□□ -0.25
Nup88Q8CEC0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup88Q8CEC0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup88Q8CEC0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.51□□□□□ -0.25
Nup88Q8CEC0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms