Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm26083-201ENSMUST00000157904 193 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm20495-201ENSMUST00000173902 235 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm38151-201ENSMUST00000195085 289 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc38Q8CDN8 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc38Q8CDN8 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Gm12196-201ENSMUST00000120954 262 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc38Q8CDN8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms