Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm11700-201ENSMUST00000119409 403 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm14585-201ENSMUST00000120713 634 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm22144-201ENSMUST00000157402 102 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm27530-201ENSMUST00000184096 98 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm28686-201ENSMUST00000187404 609 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm38314-201ENSMUST00000195709 625 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm11663-201ENSMUST00000117888 290 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm11246-201ENSMUST00000120880 345 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm28324-201ENSMUST00000187913 264 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Snora73b-201ENSMUST00000083419 205 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Vps53Q8CCB4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.36□□□□□ -0.27
Vps53Q8CCB4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm15004-201ENSMUST00000119192 630 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm7666-201ENSMUST00000146631 819 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms