Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx1Q8C8B0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm44323-201ENSMUST00000198689 129 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm42657-201ENSMUST00000201746 211 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm30671-201ENSMUST00000214898 318 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx1Q8C8B0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm13888-201ENSMUST00000119148 422 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm12516-201ENSMUST00000120819 385 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm8365-201ENSMUST00000197334 648 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm5599-201ENSMUST00000209602 788 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx1Q8C8B0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms