Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm19246-201ENSMUST00000173599 255 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm37905-201ENSMUST00000195310 341 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm5468-202ENSMUST00000227851 682 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Usp44Q8C2S0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm16071-201ENSMUST00000119589 793 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm17826-201ENSMUST00000189720 798 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm37284-201ENSMUST00000193607 539 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm37299-201ENSMUST00000193951 826 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm43058-201ENSMUST00000197645 625 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp44Q8C2S0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp44Q8C2S0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms