Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 B9d1os-201ENSMUST00000137010 674 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm44506-201ENSMUST00000206278 965 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.81□□□□□ -0.68
Ska3Q8C263 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm22920-201ENSMUST00000102175 109 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm14071-201ENSMUST00000117817 509 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm7666-201ENSMUST00000146631 819 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Ska3Q8C263 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm43138-201ENSMUST00000199123 708 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.8□□□□□ -0.68
Ska3Q8C263 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska3Q8C263 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ska3Q8C263 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.79□□□□□ -0.68
Ska3Q8C263 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska3Q8C263 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms