Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Zcwpw2-203ENSMUST00000187803 372 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm45481-201ENSMUST00000209717 877 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 AC107752.1-201ENSMUST00000219362 469 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC15.15■□□□□ 0.02
Cps1Q8C196 AC117769.1-201ENSMUST00000224716 1120 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 AC154806.7-201ENSMUST00000227998 202 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm25514-201ENSMUST00000083860 135 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC15.15■□□□□ 0.02
Cps1Q8C196 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cps1Q8C196 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 AC153524.2-202ENSMUST00000220401 1794 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.14■□□□□ 0.01
Cps1Q8C196 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm5510-201ENSMUST00000117826 486 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm6238-201ENSMUST00000120999 465 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm6291-201ENSMUST00000179994 309 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Mir8111-201ENSMUST00000184463 137 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm37851-201ENSMUST00000193871 889 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cps1Q8C196 CT010486.3-201ENSMUST00000224555 811 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.14■□□□□ 0.01
Cps1Q8C196 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cps1Q8C196 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm42971-201ENSMUST00000199228 2079 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.14■□□□□ 0.01
Cps1Q8C196 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cps1Q8C196 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cps1Q8C196 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cps1Q8C196 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cps1Q8C196 Gm43127-201ENSMUST00000195890 2789 ntBASIC15.14■□□□□ 0.01
Cps1Q8C196 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 AC124397.2-201ENSMUST00000225575 2215 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Gm17836-201ENSMUST00000191976 1302 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Gm27444-201ENSMUST00000184157 137 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Gm44420-201ENSMUST00000203669 490 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 AC101205.2-201ENSMUST00000226206 715 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 AC154436.1-201ENSMUST00000227272 782 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 BX649293.1-201ENSMUST00000227437 631 ntBASIC15.13■□□□□ 0.01
Cps1Q8C196 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cps1Q8C196 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms