Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm22920-201ENSMUST00000102175 109 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm15329-201ENSMUST00000121408 155 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm15549-201ENSMUST00000121595 622 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Olfml3-204ENSMUST00000169286 874 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm18367-201ENSMUST00000176139 600 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm9353-201ENSMUST00000200472 604 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm17825-201ENSMUST00000206836 794 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm45856-201ENSMUST00000212752 416 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm19208-201ENSMUST00000213861 912 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.8□□□□□ -0.52
Trub1Q8C0D0 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Gm25148-201ENSMUST00000104611 123 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Gm15374-201ENSMUST00000119313 844 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ginm1-202ENSMUST00000065124 300 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trub1Q8C0D0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms