Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm38314-201ENSMUST00000195709 625 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm4482-201ENSMUST00000200876 742 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm44100-201ENSMUST00000204329 436 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4Q8BQZ5 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm8199-201ENSMUST00000121323 823 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm4310-201ENSMUST00000177847 889 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm19353-201ENSMUST00000184561 445 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm3786-201ENSMUST00000202659 378 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Nsd1-205ENSMUST00000224693 852 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4Q8BQZ5 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4Q8BQZ5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms