Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Gm37597-201ENSMUST00000191853 382 ntBASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Smg1Q8BKX6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm6881-201ENSMUST00000121811 833 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm29067-201ENSMUST00000190821 470 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 AC163646.3-201ENSMUST00000228879 772 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm17147-201ENSMUST00000164176 432 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm28180-201ENSMUST00000189608 722 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Smg1Q8BKX6 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm14227-201ENSMUST00000119431 629 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm45893-201ENSMUST00000211899 247 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Gm43103-201ENSMUST00000199021 802 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 AC133517.1-201ENSMUST00000225825 594 ntBASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Smg1Q8BKX6 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms