Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm8302-201ENSMUST00000119217 852 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm11979-201ENSMUST00000119629 743 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm24992-201ENSMUST00000157412 130 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm17214-201ENSMUST00000164501 541 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm30946-201ENSMUST00000198288 724 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp6nlQ80XC3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm14274-201ENSMUST00000117182 615 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm7541-201ENSMUST00000118361 535 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm15197-201ENSMUST00000120526 478 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Mir1905-201ENSMUST00000122779 82 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Gm7525-201ENSMUST00000219425 454 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp6nlQ80XC3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp6nlQ80XC3 Mir453-201ENSMUST00000104732 82 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms