Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm13600-201ENSMUST00000117949 744 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm12030-201ENSMUST00000121917 223 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.98□□□□□ -0.65
Vrk1Q80X41 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Vrk1Q80X41 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm10169-201ENSMUST00000121822 348 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm42816-201ENSMUST00000198433 325 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm18561-201ENSMUST00000206027 804 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm5996-201ENSMUST00000211110 718 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm5805-201ENSMUST00000072779 456 ntBASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Vrk1Q80X41 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms