Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm26119-201ENSMUST00000175601 104 ntBASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Ighv5-8-202ENSMUST00000191967 337 ntBASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm4903-201ENSMUST00000210462 405 ntBASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nup98Q6PFD9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm11919-201ENSMUST00000117609 721 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm11380-201ENSMUST00000118067 560 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm15982-201ENSMUST00000121681 554 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm12745-201ENSMUST00000121767 214 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm6606-201ENSMUST00000193613 947 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup98Q6PFD9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.27□□□□□ -0.28
Nup98Q6PFD9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Gm12943-201ENSMUST00000119616 210 ntBASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Gm22344-201ENSMUST00000122642 278 ntBASIC13.27□□□□□ -0.29
Nup98Q6PFD9 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Gm7902-201ENSMUST00000198842 947 ntBASIC13.27□□□□□ -0.29
Nup98Q6PFD9 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nup98Q6PFD9 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Mir6923-201ENSMUST00000184592 72 ntBASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.26□□□□□ -0.29
Nup98Q6PFD9 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Gm8170-201ENSMUST00000218581 945 ntBASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms