Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm25226-201ENSMUST00000158198 123 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm9372-201ENSMUST00000168454 430 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm25998-201ENSMUST00000175397 53 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Mir7035-201ENSMUST00000184713 82 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm29067-201ENSMUST00000190821 470 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm43249-201ENSMUST00000200464 458 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm9791-201ENSMUST00000060997 447 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Snrnp40Q6PE01 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm11700-201ENSMUST00000119409 403 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm11993-201ENSMUST00000121861 820 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm38314-201ENSMUST00000195709 625 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm30946-201ENSMUST00000198288 724 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm44814-201ENSMUST00000207018 434 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm4903-201ENSMUST00000210462 405 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm9102-201ENSMUST00000219250 465 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms