Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm10076-201ENSMUST00000073238 384 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm6222-202ENSMUST00000182143 629 ntBASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf220Q6PDX6 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Rnf220Q6PDX6 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Rnf220Q6PDX6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm12036-201ENSMUST00000120008 530 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Gm39404-201ENSMUST00000216350 313 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Snora73a-201ENSMUST00000082453 205 ntBASIC10.83□□□□□ -0.68
Rnf220Q6PDX6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms