Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm15595-201ENSMUST00000120840 961 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm18753-201ENSMUST00000201000 566 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Casc4Q6P2L7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm8731-201ENSMUST00000118088 412 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm15432-201ENSMUST00000121106 195 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm10774-201ENSMUST00000188689 204 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm38314-201ENSMUST00000195709 625 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm18065-201ENSMUST00000221395 526 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Casc4Q6P2L7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.61□□□□□ -0.55
Casc4Q6P2L7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Casc4Q6P2L7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms