Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Gli3Q61602 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC15.05■□□□□ -0
Gli3Q61602 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Gm5766-201ENSMUST00000160520 1977 ntBASIC15.05■□□□□ -0
Gli3Q61602 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gli3Q61602 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gm38220-201ENSMUST00000195774 1447 ntBASIC15.04■□□□□ -0
Gli3Q61602 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gli3Q61602 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gli3Q61602 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Gm9515-201ENSMUST00000200276 647 ntBASIC15.04■□□□□ -0
Gli3Q61602 Gm7565-201ENSMUST00000203611 623 ntBASIC15.04■□□□□ -0
Gli3Q61602 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.04■□□□□ -0
Gli3Q61602 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.04■□□□□ -0
Gli3Q61602 Gm19090-201ENSMUST00000218187 774 ntBASIC15.04■□□□□ -0
Gli3Q61602 Gm18030-201ENSMUST00000222163 731 ntBASIC15.04■□□□□ -0
Gli3Q61602 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gli3Q61602 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gli3Q61602 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.04■□□□□ -0
Gli3Q61602 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.04■□□□□ -0
Gli3Q61602 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.04■□□□□ -0
Gli3Q61602 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gli3Q61602 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gli3Q61602 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Gm5046-201ENSMUST00000100608 611 ntBASIC15.03■□□□□ -0
Gli3Q61602 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gli3Q61602 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC15.03■□□□□ -0
Gli3Q61602 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Gli3Q61602 Gm28179-201ENSMUST00000188365 613 ntBASIC15.03■□□□□ -0
Gli3Q61602 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Gm42803-201ENSMUST00000201051 451 ntBASIC15.03■□□□□ -0
Gli3Q61602 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 BX649293.1-201ENSMUST00000227437 631 ntBASIC15.03■□□□□ -0
Gli3Q61602 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gli3Q61602 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.03■□□□□ -0
Gli3Q61602 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gli3Q61602 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gli3Q61602 Gm11235-201ENSMUST00000117763 333 ntBASIC15.02■□□□□ -0
Gli3Q61602 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gli3Q61602 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Gli3Q61602 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC15.02■□□□□ -0
Gli3Q61602 AC155300.1-201ENSMUST00000219134 480 ntBASIC15.02■□□□□ -0
Gli3Q61602 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms