Protein–RNA interactions for Protein: Q60934

Grik1, Glutamate receptor ionotropic, kainate 1, mousemouse

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik1Q60934 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Grik1Q60934 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Grik1Q60934 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.11□□□□□ -0.47
Grik1Q60934 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm26047-201ENSMUST00000157308 113 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm8531-201ENSMUST00000188319 893 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Gm26047-202ENSMUST00000198840 115 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Gm8574-201ENSMUST00000203207 924 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Gm8342-201ENSMUST00000209839 757 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Gm45594-201ENSMUST00000211717 241 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.11□□□□□ -0.47
Grik1Q60934 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.11□□□□□ -0.47
Grik1Q60934 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.11□□□□□ -0.47
Grik1Q60934 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Grik1Q60934 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Grik1Q60934 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.1□□□□□ -0.47
Grik1Q60934 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Grik1Q60934 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm12419-201ENSMUST00000116649 636 ntBASIC12.1□□□□□ -0.47
Grik1Q60934 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Grik1Q60934 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.1□□□□□ -0.47
Grik1Q60934 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.1□□□□□ -0.47
Grik1Q60934 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Grik1Q60934 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.1□□□□□ -0.47
Grik1Q60934 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Grik1Q60934 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Grik1Q60934 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Grik1Q60934 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Grik1Q60934 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms