Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClpbQ60649 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
ClpbQ60649 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClpbQ60649 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ClpbQ60649 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
ClpbQ60649 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.02□□□□□ -0.64
ClpbQ60649 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClpbQ60649 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
ClpbQ60649 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
ClpbQ60649 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm9550-201ENSMUST00000161130 862 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm9211-201ENSMUST00000182882 975 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Gm27530-201ENSMUST00000184096 98 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClpbQ60649 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClpbQ60649 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClpbQ60649 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpbQ60649 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.02□□□□□ -0.65
ClpbQ60649 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpbQ60649 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ClpbQ60649 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ClpbQ60649 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm13916-201ENSMUST00000117368 628 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm26047-201ENSMUST00000157308 113 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm22334-201ENSMUST00000158070 133 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm29499-201ENSMUST00000189151 486 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm28329-201ENSMUST00000191208 689 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm29171-201ENSMUST00000191397 486 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm5714-201ENSMUST00000197343 566 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm26047-202ENSMUST00000198840 115 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.01□□□□□ -0.65
ClpbQ60649 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.01□□□□□ -0.65
ClpbQ60649 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
ClpbQ60649 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ClpbQ60649 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
ClpbQ60649 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpbQ60649 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms