Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm14993-201ENSMUST00000121180 164 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Gm25492-201ENSMUST00000157383 129 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Gm9507-202ENSMUST00000180157 654 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Gm8197-202ENSMUST00000193422 934 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Gm42433-201ENSMUST00000196806 940 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 BC106175-202ENSMUST00000219344 1213 ntBASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx49Q4FZF3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Ddx49Q4FZF3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Ddx49Q4FZF3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm15549-201ENSMUST00000121595 622 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm18801-201ENSMUST00000186616 536 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ddx49Q4FZF3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm12663-201ENSMUST00000118481 958 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm12036-201ENSMUST00000120008 530 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm15620-201ENSMUST00000122949 270 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm37852-201ENSMUST00000193027 350 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm6855-201ENSMUST00000206307 790 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ddx49Q4FZF3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms