Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm35960-201ENSMUST00000202712 767 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm5340-201ENSMUST00000203733 880 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm2553-201ENSMUST00000215986 605 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm5451-201ENSMUST00000080545 579 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Gm14892-201ENSMUST00000117636 267 ntBASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Gm6390-201ENSMUST00000215034 589 ntBASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp48Q3V0C5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm6630-201ENSMUST00000119199 454 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm12453-201ENSMUST00000121981 331 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm24248-201ENSMUST00000157321 322 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm19587-201ENSMUST00000191395 545 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm5700-201ENSMUST00000191483 989 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Trav11n-201ENSMUST00000200113 343 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms