Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm13736-201ENSMUST00000119272 253 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm5392-201ENSMUST00000122189 789 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm16397-201ENSMUST00000122201 494 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.79□□□□□ -0.84
Znf48Q3US17 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 AC117949.2-201ENSMUST00000225900 584 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Znf48Q3US17 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC9.79□□□□□ -0.84
Znf48Q3US17 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Znf48Q3US17 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms