Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm17376-201ENSMUST00000166016 84 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm29199-201ENSMUST00000187766 775 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm38317-201ENSMUST00000195564 343 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm5705-201ENSMUST00000066241 711 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm23270-201ENSMUST00000104055 131 ntBASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim43aQ3TL54 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.15□□□□□ -0.47
Trim43aQ3TL54 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.15□□□□□ -0.47
Trim43aQ3TL54 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43aQ3TL54 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trim43aQ3TL54 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim43aQ3TL54 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Trim43aQ3TL54 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Mir433-201ENSMUST00000093564 124 ntBASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim43aQ3TL54 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms