Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm15197-201ENSMUST00000120526 478 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm13284-201ENSMUST00000121020 547 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm12030-201ENSMUST00000121917 223 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm9135-201ENSMUST00000182963 990 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm5805-201ENSMUST00000072779 456 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm8420-201ENSMUST00000097103 598 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.01□□□□□ -0.65
Hoxc4Q08624 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxc4Q08624 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Hoxc4Q08624 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm6157-201ENSMUST00000199935 1897 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Hoxc4Q08624 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11□□□□□ -0.65
Hoxc4Q08624 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm25053-201ENSMUST00000103982 133 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Gm25922-201ENSMUST00000104281 130 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc4Q08624 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm14807-201ENSMUST00000116640 983 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Gm14219-201ENSMUST00000120414 288 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm24679-201ENSMUST00000158762 111 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc4Q08624 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm17798-201ENSMUST00000182282 1035 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm25053-202ENSMUST00000199731 132 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hoxc4Q08624 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Gm10020-201ENSMUST00000081993 612 ntBASIC11□□□□□ -0.65
Hoxc4Q08624 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxc4Q08624 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11□□□□□ -0.65
Hoxc4Q08624 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms