Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm14892-201ENSMUST00000117636 267 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm15615-201ENSMUST00000118876 198 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm8459-201ENSMUST00000162504 760 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Mir6407-201ENSMUST00000184510 101 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm5805-201ENSMUST00000072779 456 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Gm8325-201ENSMUST00000099086 453 ntBASIC11.65□□□□□ -0.54
Ebf1Q07802 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf1Q07802 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ebf1Q07802 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ebf1Q07802 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
Ebf1Q07802 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.65□□□□□ -0.55
Ebf1Q07802 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf1Q07802 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf1Q07802 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf1Q07802 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf1Q07802 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ebf1Q07802 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm12990-201ENSMUST00000120372 468 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm9192-201ENSMUST00000183221 985 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm28937-201ENSMUST00000185413 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm29400-201ENSMUST00000187208 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm28662-201ENSMUST00000188446 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm28251-201ENSMUST00000188835 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm37318-201ENSMUST00000194325 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm38017-201ENSMUST00000194768 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm37287-201ENSMUST00000195449 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm37793-201ENSMUST00000195548 695 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
Ebf1Q07802 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.64□□□□□ -0.55
Ebf1Q07802 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ebf1Q07802 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms