Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm3726-201ENSMUST00000203110 785 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm19091-201ENSMUST00000208120 978 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm45120-201ENSMUST00000208880 408 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm7525-201ENSMUST00000219425 454 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.4□□□□□ -0.42
Col9a2Q07643 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a2Q07643 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a2Q07643 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a2Q07643 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a2Q07643 BC043934-202ENSMUST00000185694 2356 ntBASIC12.4□□□□□ -0.43
Col9a2Q07643 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a2Q07643 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Snord17-201ENSMUST00000104526 238 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm17192-201ENSMUST00000169031 511 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm26134-201ENSMUST00000178484 110 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.39□□□□□ -0.43
Col9a2Q07643 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.39□□□□□ -0.43
Col9a2Q07643 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a2Q07643 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm15197-201ENSMUST00000120526 478 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm13284-201ENSMUST00000121020 547 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm9353-201ENSMUST00000200472 604 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm7082-201ENSMUST00000209880 969 ntBASIC12.38□□□□□ -0.43
Col9a2Q07643 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms