Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gm12501-201ENSMUST00000119163 529 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gm5714-201ENSMUST00000197343 566 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm16505-201ENSMUST00000179981 232 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm21811-201ENSMUST00000096485 930 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 BC043934-202ENSMUST00000185694 2356 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pfdn6Q03958 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.53□□□□□ -0.56
Pfdn6Q03958 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn6Q03958 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm14277-201ENSMUST00000121195 360 ntBASIC11.52□□□□□ -0.57
Pfdn6Q03958 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.52□□□□□ -0.57
Pfdn6Q03958 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn6Q03958 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms