Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.19□□□□□ -0.14
Cacna1sQ02789 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Gm16480-201ENSMUST00000120439 832 ntBASIC14.19□□□□□ -0.14
Cacna1sQ02789 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Mir3100-201ENSMUST00000174918 65 ntBASIC14.19□□□□□ -0.14
Cacna1sQ02789 Gm22662-201ENSMUST00000175290 256 ntBASIC14.19□□□□□ -0.14
Cacna1sQ02789 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.19□□□□□ -0.14
Cacna1sQ02789 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.19□□□□□ -0.14
Cacna1sQ02789 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1sQ02789 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm17797-201ENSMUST00000182175 997 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm7255-201ENSMUST00000187371 908 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm24161-201ENSMUST00000104592 130 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm5873-201ENSMUST00000177157 1066 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm5274-201ENSMUST00000182641 1003 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm43002-201ENSMUST00000200310 155 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gm45308-201ENSMUST00000210610 415 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 CT009550.1-201ENSMUST00000225750 864 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 AC163646.3-202ENSMUST00000228685 691 ntBASIC14.18□□□□□ -0.14
Cacna1sQ02789 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cacna1sQ02789 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1sQ02789 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm7781-201ENSMUST00000117258 788 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm12950-201ENSMUST00000121683 417 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm44388-201ENSMUST00000204350 258 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm5174-201ENSMUST00000171131 1423 ntBASIC14.17□□□□□ -0.14
Cacna1sQ02789 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms