Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.79□□□□□ -0.84
Smn1P97801 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Smn1P97801 Rps4l-202ENSMUST00000204242 789 ntBASIC9.79□□□□□ -0.84
Smn1P97801 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Smn1P97801 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Smn1P97801 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.79□□□□□ -0.84
Smn1P97801 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.79□□□□□ -0.84
Smn1P97801 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.79□□□□□ -0.84
Smn1P97801 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.79□□□□□ -0.84
Smn1P97801 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smn1P97801 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.78□□□□□ -0.84
Smn1P97801 Gm14071-201ENSMUST00000117817 509 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Gm11500-201ENSMUST00000118237 601 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Gm11660-201ENSMUST00000120955 412 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Snora78-201ENSMUST00000158630 128 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Gm3329-201ENSMUST00000159873 556 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.78□□□□□ -0.84
Smn1P97801 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Gm19309-201ENSMUST00000218295 205 ntBASIC9.78□□□□□ -0.84
Smn1P97801 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.78□□□□□ -0.84
Smn1P97801 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Smn1P97801 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smn1P97801 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smn1P97801 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.77□□□□□ -0.84
Smn1P97801 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smn1P97801 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.77□□□□□ -0.84
Smn1P97801 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smn1P97801 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms