Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trim43cP86449 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43cP86449 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim43cP86449 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Trim43cP86449 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43cP86449 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43cP86449 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim43cP86449 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Gm15528-201ENSMUST00000117821 864 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Gm12566-201ENSMUST00000121479 359 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43cP86449 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43cP86449 Olfml3-204ENSMUST00000169286 874 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim43cP86449 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Spcs1-203ENSMUST00000226374 592 ntBASIC12.46□□□□□ -0.41
Trim43cP86449 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim43cP86449 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim43cP86449 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43cP86449 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trim43cP86449 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43cP86449 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43cP86449 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43cP86449 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim43cP86449 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm12218-201ENSMUST00000117666 399 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Gm11956-201ENSMUST00000119525 512 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm29067-201ENSMUST00000190821 470 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43cP86449 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.45□□□□□ -0.42
Trim43cP86449 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms