Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.29□□□□□ -0.76
SgcbP82349 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm7150-201ENSMUST00000122032 981 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm4726-201ENSMUST00000135604 736 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm6019-201ENSMUST00000148369 736 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.29□□□□□ -0.76
SgcbP82349 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm12407-201ENSMUST00000180219 324 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.29□□□□□ -0.76
SgcbP82349 Gm9211-201ENSMUST00000182882 975 ntBASIC10.29□□□□□ -0.76
SgcbP82349 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 Gm37986-201ENSMUST00000193285 383 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.29□□□□□ -0.76
SgcbP82349 Gm43316-201ENSMUST00000197252 1295 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm44506-201ENSMUST00000206278 965 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SgcbP82349 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SgcbP82349 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
SgcbP82349 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
SgcbP82349 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SgcbP82349 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Gm15573-201ENSMUST00000119487 540 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Mir3547-201ENSMUST00000175461 88 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Gm9540-201ENSMUST00000188230 478 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Gm38217-201ENSMUST00000194358 910 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SgcbP82349 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Gm4978-201ENSMUST00000071565 801 ntBASIC10.28□□□□□ -0.76
SgcbP82349 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
SgcbP82349 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SgcbP82349 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SgcbP82349 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.27□□□□□ -0.76
SgcbP82349 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SgcbP82349 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms