Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CiitaP79621 Gm14892-201ENSMUST00000117636 267 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Gm8302-201ENSMUST00000119217 852 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Gm25554-201ENSMUST00000158075 113 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Gm26134-201ENSMUST00000178484 110 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CiitaP79621 Gm45594-201ENSMUST00000211717 241 ntBASIC12.42□□□□□ -0.42
CiitaP79621 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Gm30671-201ENSMUST00000214898 318 ntBASIC12.42□□□□□ -0.42
CiitaP79621 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Gm19009-201ENSMUST00000223072 823 ntBASIC12.42□□□□□ -0.42
CiitaP79621 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.42□□□□□ -0.42
CiitaP79621 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CiitaP79621 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.41□□□□□ -0.42
CiitaP79621 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.41□□□□□ -0.42
CiitaP79621 Mir7051-201ENSMUST00000184167 73 ntBASIC12.41□□□□□ -0.42
CiitaP79621 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CiitaP79621 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.41□□□□□ -0.42
CiitaP79621 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CiitaP79621 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CiitaP79621 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
CiitaP79621 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm15744-201ENSMUST00000161734 213 ntBASIC12.4□□□□□ -0.42
CiitaP79621 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm5100-201ENSMUST00000195631 589 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Gm30946-201ENSMUST00000198288 724 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms