Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.28□□□□□ -0.6
Shox2P70390 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shox2P70390 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.27□□□□□ -0.6
Shox2P70390 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Shox2P70390 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.27□□□□□ -0.6
Shox2P70390 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Shox2P70390 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shox2P70390 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.27□□□□□ -0.61
Shox2P70390 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.27□□□□□ -0.61
Shox2P70390 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.27□□□□□ -0.61
Shox2P70390 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.27□□□□□ -0.61
Shox2P70390 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Shox2P70390 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.27□□□□□ -0.61
Shox2P70390 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shox2P70390 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Shox2P70390 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.26□□□□□ -0.61
Shox2P70390 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Shox2P70390 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.26□□□□□ -0.61
Shox2P70390 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.26□□□□□ -0.61
Shox2P70390 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.26□□□□□ -0.61
Shox2P70390 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.26□□□□□ -0.61
Shox2P70390 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.26□□□□□ -0.61
Shox2P70390 Mir7023-201ENSMUST00000185093 64 ntBASIC11.26□□□□□ -0.61
Shox2P70390 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.26□□□□□ -0.61
Shox2P70390 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.26□□□□□ -0.61
Shox2P70390 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.26□□□□□ -0.61
Shox2P70390 Gm17794-201ENSMUST00000220252 955 ntBASIC11.26□□□□□ -0.61
Shox2P70390 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Shox2P70390 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.26□□□□□ -0.61
Shox2P70390 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shox2P70390 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shox2P70390 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shox2P70390 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Shox2P70390 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms