Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rad50P70388 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Rad50P70388 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Rad50P70388 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rad50P70388 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.76□□□□□ -0.21
Rad50P70388 Gm8737-201ENSMUST00000122208 642 ntBASIC13.76□□□□□ -0.21
Rad50P70388 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.76□□□□□ -0.21
Rad50P70388 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.76□□□□□ -0.21
Rad50P70388 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Gm44008-201ENSMUST00000204345 412 ntBASIC13.76□□□□□ -0.21
Rad50P70388 Gm7600-201ENSMUST00000209657 785 ntBASIC13.76□□□□□ -0.21
Rad50P70388 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.76□□□□□ -0.21
Rad50P70388 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Rad50P70388 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Rad50P70388 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rad50P70388 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Rad50P70388 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Rad50P70388 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rad50P70388 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rad50P70388 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rad50P70388 Gm13916-201ENSMUST00000117368 628 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Gm15352-201ENSMUST00000118696 270 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Gm14585-201ENSMUST00000120713 634 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.75□□□□□ -0.21
Rad50P70388 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.75□□□□□ -0.21
Rad50P70388 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.75□□□□□ -0.21
Rad50P70388 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Gm9540-201ENSMUST00000188230 478 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Rad50P70388 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.75□□□□□ -0.21
Rad50P70388 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rad50P70388 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.75□□□□□ -0.21
Rad50P70388 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rad50P70388 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.75□□□□□ -0.21
Rad50P70388 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rad50P70388 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rad50P70388 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad50P70388 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.75□□□□□ -0.21
Rad50P70388 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rad50P70388 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.74□□□□□ -0.21
Rad50P70388 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rad50P70388 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.74□□□□□ -0.21
Rad50P70388 Gm23045-201ENSMUST00000175041 96 ntBASIC13.74□□□□□ -0.21
Rad50P70388 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.74□□□□□ -0.21
Rad50P70388 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.74□□□□□ -0.21
Rad50P70388 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rad50P70388 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad50P70388 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rad50P70388 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad50P70388 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms