Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm27530-201ENSMUST00000184096 98 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm5714-201ENSMUST00000197343 566 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm5369-201ENSMUST00000217499 588 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm7940-201ENSMUST00000218195 769 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm1821-202ENSMUST00000227415 750 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm13916-201ENSMUST00000117368 628 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm11960-201ENSMUST00000122068 925 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm37246-201ENSMUST00000192665 835 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.57□□□□□ -0.88
Pdlim4P70271 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.57□□□□□ -0.88
Pdlim4P70271 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.57□□□□□ -0.88
Pdlim4P70271 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Pdlim4P70271 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms