Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Six5P70178 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Six5P70178 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Six5P70178 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Six5P70178 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Six5P70178 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Six5P70178 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Six5P70178 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.74□□□□□ -0.69
Six5P70178 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.74□□□□□ -0.69
Six5P70178 Gm13045-201ENSMUST00000119019 712 ntBASIC10.74□□□□□ -0.69
Six5P70178 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.74□□□□□ -0.69
Six5P70178 Gm7666-201ENSMUST00000146631 819 ntBASIC10.74□□□□□ -0.69
Six5P70178 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.74□□□□□ -0.69
Six5P70178 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.74□□□□□ -0.69
Six5P70178 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Gm8342-201ENSMUST00000209839 757 ntBASIC10.74□□□□□ -0.69
Six5P70178 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.74□□□□□ -0.69
Six5P70178 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.74□□□□□ -0.69
Six5P70178 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Six5P70178 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Six5P70178 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.74□□□□□ -0.69
Six5P70178 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Six5P70178 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Six5P70178 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.73□□□□□ -0.69
Six5P70178 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Erich3-203ENSMUST00000189969 3460 ntBASIC10.73□□□□□ -0.69
Six5P70178 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.73□□□□□ -0.69
Six5P70178 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.73□□□□□ -0.69
Six5P70178 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Six5P70178 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Six5P70178 Gm12247-201ENSMUST00000117585 670 ntBASIC10.73□□□□□ -0.69
Six5P70178 Gm9062-201ENSMUST00000117712 727 ntBASIC10.73□□□□□ -0.69
Six5P70178 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.73□□□□□ -0.69
Six5P70178 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.73□□□□□ -0.69
Six5P70178 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.73□□□□□ -0.69
Six5P70178 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.73□□□□□ -0.69
Six5P70178 Gm18165-201ENSMUST00000217426 928 ntBASIC10.73□□□□□ -0.69
Six5P70178 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.73□□□□□ -0.69
Six5P70178 Spcs1-203ENSMUST00000226374 592 ntBASIC10.73□□□□□ -0.69
Six5P70178 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Six5P70178 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.73□□□□□ -0.69
Six5P70178 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Six5P70178 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Six5P70178 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Six5P70178 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.72□□□□□ -0.69
Six5P70178 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms