Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm8815-201ENSMUST00000173809 620 ntBASIC12.66□□□□□ -0.38
Hmgb1P63158 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.66□□□□□ -0.38
Hmgb1P63158 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgb1P63158 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm17376-201ENSMUST00000166016 84 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm6439-201ENSMUST00000199849 862 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.65□□□□□ -0.38
Hmgb1P63158 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Hmgb1P63158 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgb1P63158 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.65□□□□□ -0.39
Hmgb1P63158 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Hmgb1P63158 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgb1P63158 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm14724-201ENSMUST00000118400 537 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Gm15711-201ENSMUST00000118889 535 ntBASIC12.64□□□□□ -0.39
Hmgb1P63158 Mir1938-201ENSMUST00000158746 100 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms