Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lsm6P62313 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm14028-201ENSMUST00000117434 479 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Gm13035-201ENSMUST00000117496 342 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Lsm6P62313 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm6P62313 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.08□□□□□ -0.8
Lsm6P62313 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lsm6P62313 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm6P62313 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm12579-201ENSMUST00000118040 783 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Gm11941-201ENSMUST00000119904 610 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Gm11450-201ENSMUST00000121144 333 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Gm6905-201ENSMUST00000205729 511 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.07□□□□□ -0.8
Lsm6P62313 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Lsm6P62313 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.07□□□□□ -0.8
Lsm6P62313 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Lsm6P62313 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm6P62313 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms