Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Lmo4P61969 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Lmo4P61969 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm11801-201ENSMUST00000117807 746 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Gm11980-201ENSMUST00000121445 986 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Gm13445-201ENSMUST00000121664 307 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.24□□□□□ -0.93
Lmo4P61969 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm22846-201ENSMUST00000157706 270 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.24□□□□□ -0.93
Lmo4P61969 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.24□□□□□ -0.93
Lmo4P61969 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.24□□□□□ -0.93
Lmo4P61969 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Gm7959-201ENSMUST00000221823 1078 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.24□□□□□ -0.93
Lmo4P61969 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm4604-201ENSMUST00000025040 390 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.24□□□□□ -0.93
Lmo4P61969 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Lmo4P61969 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.24□□□□□ -0.93
Lmo4P61969 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Lmo4P61969 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lmo4P61969 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.23□□□□□ -0.93
Lmo4P61969 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lmo4P61969 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lmo4P61969 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms